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1

Multi-atlas segmentation of biomedical images: A survey

Iglesias, Juan Eugenio, Sabuncu, Mert R.

Journal:

Medical Image Analysis

Year:

2015

Language:

english

File:

PDF, 764 KB

english, 2015

2

A magnetic resonance multi-atlas for the neonatal rabbit brain

Ferraris, Sebastiano, van der Merwe, Johannes, Van Der Veeken, Lennart, Prados, Ferran, Iglesias, Juan-Eugenio, Melbourne, Andrew, Lorenzi, Marco, Modat, Marc, Gsell, Willy, Deprest, Jan, Vercauteren,

Journal:

Year:

2018

Language:

english

File:

PDF, 19.63 MB

english, 2018

3

Fast Approximate Stochastic Tractography

Juan Eugenio Iglesias, Paul M. Thompson, Cheng-Yi Liu, Zhuowen Tu

Journal:

Neuroinformatics

Year:

2012

Language:

english

File:

PDF, 458 KB

english, 2012

4

Mielolipoma suprarrenal gigante

Francisco Juan de Santos Iglesias, José Manuel González González, María Teresa Espín Jaime, Eugenio Hernández Antequera

Journal:

Cirugía Española

Year:

2011

Language:

spanish

File:

PDF, 219 KB

spanish, 2011

5

Pericardial effusion: Clinical and analytical parameters clues

Gustavo Iglesias Cubero, José Rubin, Maria Martín, Juan Rondan, Eugenio Simarro

Journal:

International Journal of Cardiology

Year:

2006

Language:

english

File:

PDF, 69 KB

english, 2006

6

Improved inference in Bayesian segmentation using Monte Carlo sampling: Application to hippocampal subfield volumetry

Iglesias, Juan Eugenio, Sabuncu, Mert Rory, Van Leemput, Koen

Journal:

Medical Image Analysis

Year:

2013

Language:

english

File:

PDF, 2.57 MB

english, 2013

7

Deformable Templates Guided Discriminative Models for Robust 3D Brain MRI Segmentation

Liu, Cheng-Yi, Iglesias, Juan Eugenio, Tu, Zhuowen

Journal:

Neuroinformatics

Year:

2013

Language:

english

File:

PDF, 1.61 MB

english, 2013

8

Collaboration for a systematic comparison of different techniques to measure subfield volumes: Announcement and first results

Mueller, Susanne, Yushkevich, Paul, Wang, Lei, Van Leemput, Koen, Mezher, Adam, Iglesias, Juan Eugenio, Das, Sandhitsu, Weiner, Michael

Journal:

Alzheimer's & Dementia

Year:

2013

Language:

english

File:

PDF, 47 KB

english, 2013

9

A unified framework for cross-modality multi-atlas segmentation of brain MRI

Eugenio Iglesias, Juan, Rory Sabuncu, Mert, Van Leemput, Koen

Journal:

Medical Image Analysis

Year:

2013

Language:

english

File:

PDF, 1.70 MB

english, 2013

10

[IEEE 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Rotterdam, Netherlands (2010.04.14-2010.04.17)] 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Discretizing stochastic tractography: A fast implementation

Iglesias, Juan Eugenio, Thompson, Paul, Liu, Cheng-Yi, Tu, Zhuowen

Year:

2010

Language:

english

File:

PDF, 231 KB

english, 2010

11

[IEEE 2012 IEEE 9th International Symposium on Biomedical Imaging (ISBI 2012) - Barcelona, Spain (2012.05.2-2012.05.5)] 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI) - A generative model for multi-atlas segmentation across modalities

Iglesias, Juan Eugenio, Sabuncu, Mert Rory, Van Leemput, Koen

Year:

2012

Language:

english

File:

PDF, 507 KB

english, 2012

12

An algorithm for optimal fusion of atlases with different labeling protocols

Iglesias, Juan Eugenio, Sabuncu, Mert Rory, Aganj, Iman, Bhatt, Priyanka, Casillas, Christen, Salat, David, Boxer, Adam, Fischl, Bruce, Van Leemput, Koen

Journal:

Year:

2015

Language:

english

File:

PDF, 1.66 MB

english, 2015

13

Bayesian segmentation of brainstem structures in MRI

Iglesias, Juan Eugenio, Van Leemput, Koen, Bhatt, Priyanka, Casillas, Christen, Dutt, Shubir, Schuff, Norbert, Truran-Sacrey, Diana, Boxer, Adam, Fischl, Bruce

Journal:

Year:

2015

Language:

english

File:

PDF, 2.38 MB

english, 2015

14

[IEEE 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Rotterdam, Netherlands (2010.04.14-2010.04.17)] 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Fusing adaptive atlas and informative features for robust 3D brain image segmentation

Liu, Cheng-Yi, Iglesias, Juan Eugenio, Toga, Arthur, Tu, Zhuowen

Year:

2010

Language:

english

File:

PDF, 411 KB

english, 2010

15

[IEEE 2012 IEEE Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA) - Breckenridge, CO, USA (2012.01.9-2012.01.10)] 2012 IEEE Workshop on Mathematical Methods in Biomedical Image Analysis - Pictorial multi-atlas segmentation of brain MRI

Cheng-Yi Liu,, Iglesias, Juan Eugenio, Zhuowen Tu,

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

16

Subcortical volumes differentiate Major Depressive Disorder, Bipolar Disorder, and remitted Major Depressive Disorder

Sacchet, Matthew D., Livermore, Emily E., Iglesias, Juan Eugenio, Glover, Gary H., Gotlib, Ian H.

Journal:

Journal of Psychiatric Research

Year:

2015

Language:

english

File:

PDF, 1005 KB

english, 2015

17

A computational atlas of the hippocampal formation using ex vivo, ultra-high resolution MRI: Application to adaptive segmentation of in vivo MRI

Iglesias, Juan Eugenio, Augustinack, Jean C., Nguyen, Khoa, Player, Christopher M., Player, Allison, Wright, Michelle, Roy, Nicole, Frosch, Matthew P., McKee, Ann C., Wald, Lawrence L., Fischl, Bruce,

Journal:

Year:

2015

Language:

english

File:

PDF, 3.56 MB

english, 2015

18

Modeling diffusion-weighted MRI as a spatially variant Gaussian mixture: Application to image denoising

Gonzalez, Juan Eugenio Iglesias, Thompson, Paul M., Zhao, Aishan, Tu, Zhuowen

Journal:

Medical Physics

Year:

2011

Language:

english

File:

PDF, 4.90 MB

english, 2011

19

Automated segmentation of the human hippocampus along its longitudinal axis

Lerma-Usabiaga, Garikoitz, Iglesias, Juan Eugenio, Insausti, Ricardo, Greve, Douglas N., Paz-Alonso, Pedro M.

Journal:

Human Brain Mapping

Year:

2016

Language:

english

File:

PDF, 625 KB

english, 2016

20

Bayesian longitudinal segmentation of hippocampal substructures in brain MRI using subject-specific atlases

Iglesias, Juan Eugenio, Van Leemput, Koen, Augustinack, Jean, Insausti, Ricardo, Fischl, Bruce, Reuter, Martin

Journal:

Year:

2016

Language:

english

File:

PDF, 2.31 MB

english, 2016

21

Fast and Sequence-Adaptive Whole-Brain Segmentation Using Parametric Bayesian Modeling

Puonti, Oula, Iglesias, Juan Eugenio, Leemput, Koen Van

Journal:

Year:

2016

Language:

english

File:

PDF, 1.07 MB

english, 2016

22

Progressive Decline in Hippocampal CA1 Volume in Individuals at Ultra-High-Risk for Psychosis Who Do Not Remit: Findings from the Longitudinal Youth at Risk Study

Ho, New Fei, Holt, Daphne J, Cheung, Mike, Iglesias, Juan Eugenio, Goh, Alex, Wang, Mingyuan, Lim, Joseph KW, de Souza, Joshua, Poh, Joann S, See, Yuen Mei, Adcock, Alison R, Wood, Stephen J, Chee, Mi

Journal:

Neuropsychopharmacology

Year:

2017

Language:

english

File:

PDF, 650 KB

english, 2017

23

Mid-space-independent deformable image registration

Aganj, Iman, Iglesias, Juan Eugenio, Reuter, Martin, Sabuncu, Mert Rory, Fischl, Bruce

Journal:

Year:

2017

Language:

english

File:

PDF, 1.18 MB

english, 2017

24

Sparsity enables estimation of both subcortical and cortical activity from MEG and EEG

Krishnaswamy, Pavitra, Obregon-Henao, Gabriel, Ahveninen, Jyrki, Khan, Sheraz, Babadi, Behtash, Iglesias, Juan Eugenio, Hämäläinen, Matti S., Purdon, Patrick L.

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 2.26 MB

english, 2017

25

Systematic comparison of different techniques to measure hippocampal subfield volumes in ADNI2

Mueller, Susanne G., Yushkevich, Paul A., Das, Sandhitsu, Wang, Lei, Van Leemput, Koen, Iglesias, Juan Eugenio, Alpert, Kate, Mezher, Adam, Ng, Peter, Paz, Katrina, Weiner, Michael W.

Journal:

NeuroImage: Clinical

Year:

2018

Language:

english

File:

PDF, 1.20 MB

english, 2018

26

A Survey of Methods for 3D Histology Reconstruction

Pichat, Jonas, Iglesias, Juan Eugenio, Yousry, Tarek, Ourselin, Sébastien, Modat, Marc

Journal:

Medical Image Analysis

Year:

2018

Language:

english

File:

PDF, 2.29 MB

english, 2018

27

[IEEE 2017 IEEE International Conference on Computer Vision Workshop (ICCVW) - Venice (2017.10.22-2017.10.29)] 2017 IEEE International Conference on Computer Vision Workshops (ICCVW) - Part-to-Whole Registration of Histology and MRI Using Shape Elements

Pichat, Jonas, Iglesias, Juan Eugenio, Nousias, Sotiris, Yousry, Tarek

Year:

2017

Language:

english

File:

PDF, 836 KB

english, 2017

28

Hippocampal Subfield Volumetry: Differential Pattern of Atrophy in Different Forms of Genetic Frontotemporal Dementia

Bocchetta, Martina, Iglesias, Juan Eugenio, Scelsi, Marzia A., Cash, David M., Cardoso, M. Jorge, Modat, Marc, Altmann, Andre, Ourselin, Sebastien, Warren, Jason D., Rohrer, Jonathan D., Sala-Llonch,

Journal:

Journal of Alzheimer's Disease

Year:

2018

Language:

english

File:

PDF, 223 KB

english, 2018

29

A probabilistic atlas of the human thalamic nuclei combining ex vivo MRI and histology

Iglesias, Juan Eugenio, Insausti, Ricardo, Lerma-Usabiaga, Garikoitz, Bocchetta, Martina, Van Leemput, Koen, Greve, Douglas N., van der Kouwe, Andre, Fischl, Bruce, Caballero-Gaudes, César, Paz-Alonso

Journal:

Year:

2018

File:

PDF, 3.96 MB

2018

30

A probabilistic atlas of the human thalamic nuclei combining ex vivo MRI and histology

Iglesias, Juan Eugenio, Insausti, Ricardo, Lerma-Usabiaga, Garikoitz, Bocchetta, Martina, Van Leemput, Koen, Greve, Douglas N., van der Kouwe, Andre, Fischl, Bruce, Caballero-Gaudes, César, Paz-Alonso

Journal:

Year:

2018

Language:

english

File:

PDF, 3.96 MB

english, 2018

31

Multivariate Approaches in Neuroimaging: Assessing the Connectome of Alzheimer’s Disease

Górriz, Juan Manuel, Iglesias-González, Eugenio, Ramirez, Javier

Journal:

Journal of Alzheimer's Disease

Year:

2018

Language:

english

File:

PDF, 40 KB

english, 2018

32

Joint registration and synthesis using a probabilistic model for alignment of MRI and histological sections

Iglesias, Juan Eugenio, Modat, Marc, Peter, Loïc, Stevens, Allison, Annunziata, Roberto, Vercauteren, Tom, Lein, Ed, Fischl, Bruce, Ourselin, Sebastien

Journal:

Medical Image Analysis

Year:

2018

Language:

english

File:

PDF, 9.95 MB

english, 2018

33

Smaller hippocampal CA1 subfield volume in posttraumatic stress disorder

Chen, Lyon W., Sun, Delin, Davis, Sarah L., Haswell, Courtney C., Dennis, Emily L., Swanson, Chelsea A., Whelan, Christopher D., Gutman, Boris, Jahanshad, Neda, Iglesias, Juan Eugenio, Thompson, Paul,

Journal:

Depression and Anxiety

Year:

2018

Language:

english

File:

PDF, 674 KB

english, 2018

34

Segmentation of medial temporal subregions reveals early right-sided involvement in semantic variant PPA

Bocchetta, Martina, Iglesias, Juan Eugenio, Russell, Lucy L., Greaves, Caroline V., Marshall, Charles R., Scelsi, Marzia A., Cash, David M., Ourselin, Sebastien, Warren, Jason D., Rohrer, Jonathan D.

Journal:

Alzheimer's Research & Therapy

Year:

2019

File:

PDF, 1.27 MB

2019

35

Correction: Progressive decline in hippocampal CA1 volume in individuals at ultra-high-risk for psychosis who do not remit: findings from the longitudinal youth at risk study

Ho, New Fei, Holt, Daphne J., Cheung, Mike, Iglesias, Juan Eugenio, Goh, Alex, Wang, Mingyuan, Lim, Joseph K. W., de Souza, Joshua, Poh, Joann S., See, Yuen Mei, Adcock, R. Alison, Wood, Stephen J., C

Journal:

Neuropsychopharmacology

Year:

2019

Language:

english

File:

PDF, 259 KB

english, 2019

36

Impact of different models of improvement of continuity of care on lipid control and the delay of visits to cardiology

Cosin-Sales, Juan, Freixa, Roman, Bravo, Marisol, Ruvira, Jorge, GrÃ cia, Pere Blanch, Calvo Iglesias, Francisco Eugenio, Escobar, Carlos

Journal:

Future Cardiology

Year:

2020

File:

PDF, 1.27 MB

2020

37

A multimodal computational pipeline for 3D histology of the human brain

Mancini, Matteo, Casamitjana, AdriÃ , Peter, Loic, Robinson, Eleanor, Crampsie, Shauna, Thomas, David L., Holton, Janice L., Jaunmuktane, Zane, Iglesias, Juan Eugenio

Journal:

Scientific Reports

Year:

2020

File:

PDF, 3.90 MB

2020

38

Automated segmentation of the hypothalamus and associated subunits in brain MRI

Billot, Benjamin, Bocchetta, Martina, Todd, Emily, Dalca, Adrian V., Rohrer, Jonathan D., Iglesias, Juan Eugenio

Journal:

Year:

2020

File:

PDF, 3.11 MB

2020

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